CONTACT INFORMATION
Professor: Mary L. Kraft
University of Illinois
600 S Mathews Ave
208 RAL, MC-712
Urbana, IL 61801
phone: 217-333-2228
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publications
  1. Gorman, B. L.; Brunet, M.A.; Kraft, M. L."Depth correction of 3D NanoSIMS images using secondary electron pixel intensity," Biointerphases, 2021, 16 (4), 041005. DOI: 10.1116/6.0001092.
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  2. Pastrana-Otero, I.; Majumdar, S.; Gilchrist, A. G.; Gorman, B. L.; Harley, B. A. C.; Kraft, M. L. "Development of an inexpensive Raman-compatible substrate for the construction of a microarray screening platform," Analyst, 2020, 145, 7030-7039. DOI: 10.1039/d0an01153c.
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  3. Majumdar, S.; Kraft, M. L. "Exploring the maturation of a monocytic cell line using self-organizing maps of single-cell Raman spectra," Biointerphases, 2020, 15, 041010. DOI: 10.1116/6.0000363.
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  4. Gorman, B. L.; Brunet, M.A.; Pham, S. N.; Kraft, M. L. "Measurement of Absolute Concentration at the Subcellular Scale," ACS Nano, 2020, 14 (6), 6414-6419. DOI: 10.1021/acsnano.0c04285.
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  5. Gorman, B. L.; Kraft, M. L. "High-Resolution Secondary Ion Mass Spectrometry Analysis of Cell Membranes," Analytical Chemistry, 2020, 92 (2), 1645-1652. DOI: 10.1021/acs.analchem.9b04492.
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  6. Gorman, B. L.; Yeager, A. N.; Chini, C. E.; Kraft, M. L. "Imaging the distributions of lipids and proteins in the plasma membrane with high-resolution secondary ion mass spectrometry," in Characterization of Biological Membranes: Structure and Dynamics; Eds.: Nieh, M.-P.; Heberle, F. A.; Katsaras, J.; De Gruyter: Berlin, Boston. 2019; Chapter 9, 287-322. DOI:10.1515/9783110544657-009.
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  7. Choi, J. S.; Ilin, Y.; Kraft, M. L.; Harley B. A. C. "Tracing Hematopoietic Progenitor Cell Neutrophilic Differentiation via Raman Spectroscopy," Bioconjugate Chemistry, 2018, 29 (9), 3121-3128. DOI: https://doi.org/10.1515/9783110544657-009.
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  8. Yeager, A. N.; Weber, P. K.; Kraft, M. L. "Cholesterol is enriched in the sphingolipid patches on the substrate near nonpolarized MDCK cells, but not in the sphingolipid domains in their plasma membranes," Biochimica et Biophysica Acta, Biomembranes, 2018, 1860 (10), 2004-2011. DOI:10.1016/j.bbamem.2018.04.008.
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  9. Mirshafiee, V.; Harley, B. A. C.; Kraft, M. L. "Visualizing Intra-Population Hematopoietic Cell Heterogeneity with Self-Organizing Maps of SIMS Data," Tissue Engineering Part C: Methods, 2018, 24 (6), 322 - 330. DOI:10.1089/ten.TEC.2017.0382.
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  10. Chini, C. E,; Fisher, G. L.; Johnson, B.; Tamkun, M. M.; Kraft, M. L. "Observation of endoplasmic reticulum tubules via TOF-SIMS tandem mass spectrometry imaging of transfected cells," Biointerphases 2018, 13 (3), 03B409. DOI: 10.1116/1.5019736.
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  11. Kraft, M. L. "Sphingolipid Organization in the Plasma Membrane and the Mechanisms That Influence It," Frontiers in Cell and Developmental Biology, 2017, 4 (154), DOI: 10.3389/fcell.2016.00154.
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  12. Yeager, A. N..; Weber, P. K.; Kraft, M. L. "Three-dimensional imaging of cholesterol and sphingolipids within a Madin-Darby canine kidney cell," Biointerphases, 2016, 11 (2), 02A309. DOI: 10.1116/1.4939681.
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  13. Mirshafiee, V.; Kim, R.; Mahmoudi, M.; Kraft, M. L. "The importance of selecting a proper biological milieu for protein corona analysis in vitro: Human plasma vs. human serum," The International Journal of Biochemistry & Cell Biology, 2016, 75, 188-195. DOI: 10.1016/j.biocel.2015.11.019.
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  14. Mirshafiee, V.*; Kim, R.*; Park, S.; Mahmoudi, M.; Kraft, M. L. "Impact of protein pre-coating on the protein corona composition and nanoparticle cellular uptake", Biomaterials, 2016, 75, 295-304. DOI: 10.1016/j.biomaterials.2015.10.019. *VM and RK contributed equally to this work.
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  15. Ilin, Y.; Choi, J. S.; Harley, B. A. C.; Kraft, M. L. "Identifying states along the hematopoietic stem cell differentiation hierarchy with single cell specificity via Raman spectroscopy," Analytical Chemistry, 2015 87 (22), 11317-11324. DOI: 10.1021/acs.analchem.5b02537.
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  16. Wilson, R. L.; Frisz, J. F.; Klitzing, H. A.; Zimmerberg, J.; Weber, P. K.; Kraft, M. L. "Hemagglutinin clusters in the plasma membrane are not enriched with cholesterol and sphingolipids," Biophysical Journal, 2015, 108 (7), 1652-1659, DOI: 10.1016/j.bpj.2015.02.026.
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  17. Ilin, Y.; Kraft, M. L. "Secondary ion mass spectrometry and Raman spectroscopy for tissue engineering applications," Current Opinion in Biotechnology, 2015, 31, 108-116, doi: 10.1016/j.copbio.2014.10.011.
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  18. Kraft, M. L.; Klitzing, H. A. "Imaging Lipids with Secondary Ion Mass Spectrometry," Biochimica et Biophysica Acta, Molecular and Cell Biology of Lipids, 2014, 1841 (8), 1108-1119, DOI: 10.1016/j.bbalip.2014.03.003.
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  19. Ilin, Y.; Kraft, M. L. "Identifying the lineages of individual cells in cocultures by multivariate analysis of Raman spectra," Analyst, 2014, 139, 2177-2185, DOI: 10.1039/c3an02156d.
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  20. Kraft, M. L. "Plasma membrane organization and function: moving past lipid rafts," Molecular Biology of the Cell, 2013, 24 (18), 2765-2768, doi: 10.1091/mbc.E13-03-0165.
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  21. Frisz, J. F.; Klitzing, H. A.; Lou, K.; Hutcheon, I. D.; Weber, P. K.; Zimmerberg, J.; Kraft, M. L. "Sphingolipid Domains in the Plasma Membranes of Fibroblasts are Not Enriched with Cholesterol," Journal of Biological Chemistry, 2013, 288, 16855-16861, doi: 10.1074/jbc.M113.473207.
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  22. Mirshafiee, V.; Mahmoudi, M.; Lou, K.; Cheng, J.; Kraft, M. L. "Protein Corona Significantly Reduces Active Targeting Yield," Chemical Communications, 2013, 49 (25), 2557-2559, DOI: 10.1039/C3CC37307J.
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  23. Frisz, J. F*.; Lou, K.*; Klitzing, H. A.; Hanafin, W. P.; Lizunov, V.; Wilson, R. L.; Carpenter, K. J.; Kim, R.; Hutcheon, I. D.; Zimmerberg, J.; Weber, P. K.; Kraft, M. L. "Direct chemical evidence for sphingolipid domains in the plasma membranes of fibroblasts," Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (8), E613-E622, DOI: 10.1073/pnas.1216585110. *JFF and KL contributed equally to this work.
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  24. Wilson, R. L.; Kraft, M. L. "Quantifying the Molar Percentages of Cholesterol in Supported Lipid Membranes by Time-of-Flight Secondary Ion Mass Spectrometry and Multivariate Analysis," Analytical Chemistry, 2013, 85 (1), 91-97, DOI: 10.1021/ac301856z.
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  25. Kim, R.*; Lou, K.*; Kraft, M. L. "A new long wavelength borondipyrromethene (BODIPY) sphingosine for studying sphingolipid dynamics in live cells," Journal of Lipid Research, 2013, 54 (1), 265-275, DOI: 10.1194/jlr.D029207. *RK and KL contributed equally to this work.
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  26. Klitzing, H. A.; Weber, P. K.; Kraft, M. L. “Secondary ion mass spectrometry imaging of biological membranes at high spatial resolution,” in “Nanoimaging: Methods and Protocols; Eds.: A. A. Sousa and M. J. Kruhlak; Humana Press: Totowa, New Jersey. 2013; Vol. 950, Chapter 26, 483-501.
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  27. Frisz, J. F.; Choi, J. S.; Wilson, R. L.; Harley, B. A. C.; Kraft, M. L. "Identifying the Differentiation Stage of Individual Primary Hematopoietic Cells from Mouse Bone Marrow by Multivariate Analysis of TOF-Secondary Ion Mass Spectrometry Data," Analytical Chemistry, 2012, 84 (10), 4307-4313, DOI:10.1021/ac203329j.
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  28. Wilson, R. L.; Frisz, J. F.; Hanafin, W. P.; Carpenter, K. J.; Hutcheon, I. D.; Weber, P. K.; Kraft, M. L. "Fluorinated colloidal gold immunolabels for imaging select proteins in parallel with lipids using high-resolution secondary ion mass spectrometry," Bioconjugate Chemistry, 2012, 23 (3), 450-460, DOI:10.1021/bc200482z.
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  29. Anderton, C. R.; Vaezian, B.; Lou, K.; Kraft, M. L. "Identification of a lipid-related peak set to enhance the interpretation of TOF-SIMS data from model and cellular membranes," Surface and Interface Analysis, 2012, 44 (3), 322-333, DOI: 10.1002/sia.3806.
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  30. Lizunov, V.; Chlanda, P.; Kraft, M. L.; Zimmerberg, J. "Long, Saturated Chains: Tasty Domains for Kinases of Insulin Resistance," Developmental Cell, 2011, 21 (4), 604-606, DOI:10.1016/j.devcel.2011.10.001.
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  31. Anderton, C. R.; Weber, P. K.; Lou, K.; Hutcheon, I. D.; Kraft, M. L. "Correlated AFM and NanoSIMS imaging to probe cholesterol-induced changes in phase behavior and non-ideal mixing in ternary lipid membranes,” Biochimica et Biophysica Acta, Biomembranes, 2011, 1808 (1), 307-315, DOI:10.1016/j.bbamem.2010.09.016.
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  32. Vaezian, B.; Anderton, C. R.; Kraft, M. L. "Discriminating and Imaging Different Phosphatidylcholine Species within Phase-Separated Model Membranes by Principal Component Analysis of TOF-Secondary Ion Mass Spectrometry Images,” Analytical Chemistry, 2010, 82 (24), 10006-10014, DOI:10.1021/ac101640c.
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  33. Boxer, S. G.; Kraft, M. L.; Weber, P. K., Advances in secondary ion mass spectrometry applied to biological samples,” Annual Review of Biophysics, 2009, 38, 53-74, DOI:10.1146/annurev.biophys.050708.133634.
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  34. Moore, J. S. and Kraft, M. L. Synchronized self-assembly, Science 2008, 320 (5876), 620-621, DOI:10.1126/science.1157225.
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  35. Kraft, M. L.; Weber, P. K.; Longo, M. L.; Hutcheon, I. D.; Boxer, S. G. Phase separation of lipid membranes analyzed with high-resolution secondary ion mass spectrometry, Science, 2006, 313, 1948-1951, DOI:10.1126/science.1130279. Highlighted in: Science, Chemical & Engineering News, and Nature Nanotechnology.
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  36. Kraft, M. L.; Fishel, S. F.; Galli Marxer, C.; Weber, P. K.; Hutcheon, I. D.; Boxer, S. G. Quantitative analysis of supported membrane composition using the NanoSIMS, Applied Surface Science, 2006, 252 (19), 6950-6956, DOI:10.1016/j.apsusc.2006.02.116.
    37. c
  37. Kraft, M. L.; Galli Marxer, C.; Weber, P. K.; Hutcheon, I. D.; Boxer, S. G. Supported membrane composition analysis by secondary ion mass spectrometry with high lateral resolution, Biophysical Journal, 2005, 88 (4), 2965-2975, DOI:10.1529/biophysj.104.057257.
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  38. Yoshina-Ishii, C.; Miller, G. P.; Kraft, M. L.; Kool, E. T.; Boxer, S. G. General method for modification of liposomes for encoded assembly on supported bilayers, Journal of the American Chemical Society, 2005127 (5), 1356-1357, DOI:10.1021/ja043299k.
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  39. Kraft, M. L. and Moore, J. S. Multitechnique characterization of fatty acid-modified microgels, Langmuir, 2004, 20 (4), 1111-1119, DOI:10.1021/la035617j.
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  40. Kraft, M. L. and Moore, J. S. n-Alkyl fatty acid-modified microgels: ion permeation as a function of chain length, Langmuir, 2003, 19 (3), 910-915, DOI:10.1021/la0266637.
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  41. Kraft, M. L.; Robinson, S. J.; Moore, J. S. Fatty acid-modified microgels: transmission electron microscopy study, Surface and Interface Analysis, 2003, 35 (13), 1065-1068, DOI:10.1002/sia.1644.
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  42. Plunkett, K. N.; Kraft, M. L.; Yu, Q.; Moore, J. S. Swelling kinetics of disulfide crosslinked microgels, Macromolecules, 2003, 36 (11), 3960-3966, DOI:10.1021/ma025874f.
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  43. Kraft, M. L. and Moore, J. S. Surfactant-induced lysis of lipid-modified microgels, Journal of the American Chemical Society, 2001, 123 (51), 12921-12922, DOI:10.1021/ja016975g.
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  44. Beebe, D. J.; Moore, J. S.; Yu, Q.; Liu, R. H.; Kraft, M. L.; Jo, B.-H.; Devadoss, C. Microfluidic tectonics: A comprehensive platform for microfluidic systems, Proceedings of the National Academy of Sciences of the United States of America, 2000, 97 (25), 13488-13493, DOI:10.1073/pnas.250273097.

Contributions to Scientific Newsletters

  1. Kraft, M. L.; Kim, R. "Our evolving view of plasma membrane domains" ASBMB Today, 2014, 13 (8), 20 - 21.